CALS 085 COMPUTER APPLICATIONS in Agriculture & Life Science SYLLABUS Spring 2009 (3 credits)

Lecture A: Thursday 1:00-1:50 CODE: 11859   Aiken Building, Room 116.

LAB SCHEDULE:  All students are REQUIRED to attend one 2-hour lab per week during the semester.  The two labs are listed below.

Lab Schedule:
Lab Section Day Time Place Instructors
A01 11863 Tuesdays 10:00-11:30am
005 Morrill Nina Burdett & Emily Moffit
A02 11870 Fridays 9:35-11:30am 005 Morrill Dan Kirk
A03 14298 Mondays 8:30-10:30am 005 Morrill Lance Jennings & Amanda Ochoa

Instructors:

Dr. Jonathan Leonard Amanda Ochoa Lance Jennings Nina Burdett Dan Kirk Emily Moffit
208H Morrill Hall          
802-656-2979 305 Converse Hall 384 College, Apt. 3 138 Centennial Court Burlington Home: 3 Spring St, Burlington
Office: 004 Morrill Hall
384 Main Street, Burlington
Home: 802-434-3787 (Call before 9pm) 636-699-0975 303-763-0005 603-499-5665 610 639 1570 484-354-3983
jleonard@uvm.edu Amanda.Ochoa@uvm.edu Lance.Jennings@uvm.edu Nina.Burdett@uvm.edu danieljkirk@gmail.com Emily.Moffitt@uvm.edu
Office: 8:15-10:15 Wednesdays          

GENERAL COURSE GOAL: To prepare students with a solid foundation of information technology skills and knowledge that will be useful at UVM and beyond.

SPECIFIC COURSE OBJECTIVES: Upon satisfactory completion of CALS 85, students will:

1.  Become familiar with information technology hardware including types of computers and telecommunication hardware.
2. Understand the role of Operating Systems and demonstrate knowledge of command-line UNIX, and Windows XP.
3. Demonstrate file and folder management on PC, disk, flash memory stick, and zoo home directory server and backup directory server.
4. Detect and elimination of Computer Viruses & Spyware and protect your PC with Zone Alarm fire-wall software.
5. Demonstrate proficiency with electronic communication: e-mail,
etiquette, emoticons, attachments, and signature files.
6. Be familiar with the Blackboard environment and post journal entries.
7. Demonstrate proficiency in presentation graphics applications by giving a PowerPoint presentation in front of a class.
8. Demonstrate proficiency in word processing applications including tab formatting, inserting symbols, hanging indents, and citing references for ideas and images.
9. Demonstrate proficiency in converting between decimal and binary numbers, and understand basic use of binary in coding for text, images, sound, and video.
10. Demonstrate proficiency in spreadsheet and graphing applications including choosing the correct graph type for a specific audience, given a data set.
11. Understand and demonstrate how to present and interpret data in graphic form including basic descriptive statistics.
12. Understand what a peer-reviewed publication is, and the difference between primary, secondary, and tertiary data.
13. Demonstrate finding reliable, credible sources of information on the web, and printed paper sources in the University library stacks.
14. Find useful data on the Internet, be critical of those data, and interpret those data.
15. Demonstrate knowledge of data classification (Nominal, Ordinal, Interval, etc.).
16. Understand and interpret X Y scatter plots, box plots, histograms, population pyramids, and choropleth maps.
17. Create World Wide Web Pages using HTML code and publish on the web using the zoo web server.
18. Understand the history and legacy of computing.
19. Appreciate the utility, benefit and limitations of computers and information technology.
20. Improve writing skills.

Required Text:

Graphing Statistics & Data: Creating Better Charts  by Anders Wallgren, Britt Wallgren, Rolf Persson, Ulf Jorner, & Jan-Aage Haaland.  1996.  SAGE Publications.  ISBN 0-7619-0599-5
 One copy of the text is available for 2-hour loan from the Reserve Desk at the Bailey-Howe Library.

GRADE POLICIES: The following categories contribute to your course grade as weighted below:

Grade Policies:
 
Lab Assignments
60%
3 Exams
30%
Blackboard IT discussion postings   5%
Participation, and attitude  5%
In addition, you must be present for all lectures and labs.  -1% per absence
 

Grading:  Students begin with no points (0), and earn points.  Students never lose points on an assignment; instead, they earn them.

Exams will cover material from the reading assignments as well as discussion in lecture, and material from lab.  The format of the exams will be multiple choice.  You must be on time for exams.  If you are late for exams, you will lose points.  Cell phones, I-pods, or any electronics with ear buds or screens are not permitted during exams.  See Lecture Syllabus below for schedule.

Exam Reschedule or Make Up Policy: Any requests to take the exam at other than the scheduled time must be discussed with Dr. Leonard at least one week prior to the exam. Only in the case of medical emergency, death in the family, or other extreme circumstance are missed exams excused and re-taken (contact Rose Laba in the CALS Dean's Office, who will contact Prof. Leonard with an official excuse: Rose Laba, rlaba@uvm.edu, 656-0289).  In such extreme circumstances you are to notify Rose and Dr. Leonard within 24 hours of the event.  Keep your old graded exams for one year after the course.

Computer Lab Assignments vary in point value; the Final Lab Project is worth 150 points, the other assignments vary from 10 to 50 points each.  Exceptionally creative work may earn a grade above the point value of the assignment.  Paper lab assignments should be stapled together and handed in at the beginning of scheduled lab time.  YOUR NAME AND LAB SECTION SHOULD APPEAR ON ALL ASSIGNMENTS.  You may re-submit assignments for re-grading WITHIN TWO WEEKS OF THE DUE DATE (not accepted later); please include your old, already graded assignment, along with the re-done work.  The sooner you re-submit, the more generous your lab instructor will be in re-grading.  Save your graded homework assignments for one year after the course. It is your responsibility to find a printer that works and print the assignments BEFORE they are due at the beginning of lab.

LATE PENALTY:  Lab assignments are collected at the beginning of lab.  If the assignment is not ready at the beginning of lab there is a late penalty of 10% off the value of the assignment per week, up to two weeks from the due date.  If the assignment is any later than two weeks from the due date: NO CREDIT.

Attendance:  Unexcused absences or lateness will result in a deduction of 1% of your course grade per unexcused absence or lateness.  Athletes are excused only for Varsity Games (and work is expected to be made up within one week).  If you are late, you will be marked absent. Absences and lateness are excused only in cases of extreme emergency: illness death in the family, or other extreme circumstances (contact Rose Laba in the CALS Dean's Office, who will contact Prof. Leonard with an official excuse: Rose Laba, rlaba@uvm.edu, 656-0289) .  In such circumstances, notify your lecture and lab instructor and Rose Laba in the CALS Dean's Office within 24 hours of missing class.

Online Blackboard Discussion, Participation, and Attitude:  Five percent of your grade is determined by online discussion on Blackboard, class participation (how you contributed to the class), and your attitude.  You are expected to be on your seat a few minutes before lecture or lab begins.   In order to earn full credit you must attend all the lectures and labs and contribute to the class in a positive way by helping other students and participating in class and online discussions.  A minimum of one discussion posting to your lab per week is expected.  

Religious Holidays:  (University Policy) Students have the right to practice the religion of their choice. Each semester students should submit in writing to their instructors by the end of the second full week of classes their documented religious holiday schedule for the semester.  Students have two weeks to complete the assignments missed due to religious holidays.  If assignments are not completed within the two week time period, students will earn no credit for the assignments missed.

What to post on Blackboard Discussions:  Post information technology related news you hear about.  Post thoughts or questions about our class or other classes or experiences you have had such as: readings, lab or lecture material, and life experiences that were interesting.  Postings about class-related material that is confusing, or makes you think of connections to other courses or experiences in your life, are welcome.  Contact lab mates, or reply to their postings giving your own opinion or suggestions to questions they posted. Organize study sessions or reviews of our class or other class material.  Constructive criticism or suggestions for future lectures and labs is welcome.  To earn full credit, you should post at least once every week during the semester (14 postings minimum).  Replies to other postings count as postings.

What not to post on Blackboard Discussions:  Hurtful, thoughts or strong negative criticism of others in our class, are not welcome.  Whining or excessive complaining about this or any other UVM course is not appropriate.  Do not post about drinking, drugs, or sex.  

Class Behavior  Students are expected to have a positive attitude and to arrive to lecture and lab a few minutes early and be in their seat when class time begins.  Cell phone use or text messaging or emailing during lecture or lab is not permitted.  Only one person should be speaking during class at any time.  If you need to leave class early, notify the instructor BEFORE the class begins.  You will be asked to leave the class and you will loose at least one percent of your course grade each time you: 1. continue to talk while the recognized speaker is talking, 2. fall asleep during class, 3. read the newspaper or do other assignments not related to our class,  4. leave the class early without prior permission of the instructor,  5. talk on your cell phone, text message, or email during class,  6. are late for class. Being late to class, leaving early without notifying the instructor, hurtful or strong negative criticism of others, is not appropriate or welcome.  Whining or excessive complaining about this or any other UVM course is not appropriate in class.
    You are expected to come to class with a pen and notebook and to take notes.   It is appropriate and acceptable to raise your hand and ask questions during class.  You may eat food and drink water during class. 

PLAGIARISM:
It is expected that you will help your fellow students with techniques of computer use, but always hand in original work.  For example, if the assignment for the week was to create a population pyramid, you are expected to help students who are not as familiar as you with the use of the spreadsheet graphing software.  This does not mean that you can copy work or take it off the Internet without crediting the original source.  ALL STUDENTS ARE EXPECTED TO HAND IN THEIR OWN ORIGINAL WORK.  Students have been severely penalized in the past for not following these instructions.  You must cite any information that is not common knowledge in any homework assignment.  See examples of what is plagiarism and what is not,
here.

LAB USE POLICY:
Students may use the labs whenever there are no scheduled classes or workshops.  Schedules are posted on lab doors.

LAB ROOM HOURS (Unless posted otherwise):

  http://www.uvm.edu/~jleonard/labsched.html

  http://scripts.uvm.edu/cgi-bin/lab.pl

LAB HELP POLICY:  There will be some lab assistant help available in the lab during most hours.  Lab assistants may not be able to help you with all your problems with the course.  When not in a formal lab, you will be expected to rely on classmates, class notes, online help, and lab assistants when available.  If you need extra help, make an appointment with your lab instructor.  Formal tutoring may be available.

WORK LOAD TO EXPECT:  In order to complete the work in this class you can expect to spend (on average) 6-10 hours per week OUTSIDE OF CLASS AND FORMAL LAB TIME studying and working in lab on CALS 85 assignments.

HINTS ON DOING WELL IN CALS 85:
You don't have to be a "rocket scientist" or "computer wiz" to do well in this class.  This is a course where you will do well if you go to class, follow instructions, complete all your lab assignments on time and spend time reading and studying outside of formal lecture and lab.

Don't wait to the last minute for completing an assignment.  If you have a job or other commitments outside of regular school work or a heavy course load be sure your work hours allow enough time to complete your assignments.

The instructions on how to complete lab assignments will be given in the formal labs.  It is your responsibility to take notes during formal lab time and make sure you understand how to complete the assignments.  Part of the learning experience in this class is using online help and fellow students as references.  Although some of the Lab Assistants will be able to help, they will not be able to help you at all times; they will not do the assignments for you.

This course is designed not only to give you experience on the PC, but also to teach you computing concepts so you will be able to work through any software on any personal computer and many servers and host computers.

Spring 2009 LECTURE Readings and Assignments  
Week beginnings:
Material Covered
Reading Due
Jan 12
Welcome!,   Lab Preview Power Point Presentation, IT Knowledge Quiz.
None
Jan 19 LECTURE CANCELLED (Mon, Wed, Fri)- Martin Luther King Holiday.  Labs will meet this week.  Monday lab go to another lab just for this week (Presidents Day)! Google article from Newsweek , How Search Engines work from Sci Am.  Use your UVMnet-ID (zoo login and password) to read online with Adobe Acrobat.
Jan 26
Information Technology in Perspective:  Time Line 1, Anatomy of PC, Operating systems, OS History Video, Lab Preview FTP folder & file management.
How Internet e-mail works.  Text Sections 1-2 (pages 0-16)
Feb 2
Types of computers. Anatomy of PC.  Units of Memory and Storage, . Digital cameras from How Things Work ,   How digital cameras work from Sci Am .  Text Section 3 (pages 17-23)
Feb 9
Lab Preview Pine on zoo. Difference between memory & storage.  Types of Data, Graphing Exercise 1,  OS History Video. CD Players,   Sound coded as bits. Laser Printers, Scanners, Optical character readers.  Text Sections 4-6 (pages 24-45)
Feb 16 LECTURE CANCELLED (Mon, Wed, Fri)- Presidents' Day.  Labs will meet this week. 
Monday lab go to another lab just for this week (Presidents Day)!
CD Players,   Sound coded as bits. Laser Printers, Scanners, Optical character readers.  Text Sections 4-6 (pages 24-45)
Feb 23
First Exam!  You must be on time for class or lose points!
March 2 TUESDAY labs meet! Graph Exercise 1 Review, Anti-Virus strategies, Binary Numbers.  First Exam Review. Lab Preview Resume construction. Class Histogram.Tuesday lecture catch-up: Graph Exercise 1 Review, Anti-Virus strategies, Binary Numbers.  First Exam Review. Lab Preview Resume construction. Class Histogram. Digital thermometers and scales, Analog to digital converters, Digital to analog converters  Text Section 7-8 (pages 46-53)
March 9
Spring Break, No lectures, No labs this week.  
March 16
 Exam Return, Lab Preview spreadsheets Backup disk array.  Descriptive Statistics.  ASCII code, Converting Decimal to Binary numbers.  Graph Exercise 2 review. Voyager II article, Sci. Am. Nov. 1986, Optical fibers, Competing technologies for broad band home access.  Text Sections 9-10 (pages 54-63)
March 23
Lab Preview web pages.   Graphing Exercise Three.   History of the Internet Video.   Protocol and packets.  Primary, Secondary, Tertiary data.  How Hackers Break In  Sci. Am. October 1998, The Zombie Hunters (New Yorker, Oct 10, 2005)
March 30
Second Exam!   You must be on time for class or lose points
April 6
Exam Return.  Lab Preview web pages.  Graph Practice Three Review.  Binary used in Images.  History of the Internet Video.  Index vs no Index.html.  Class Evaluations & Surveys,  
April 13
Packet error checking algorithms: Sum check details, parity check. Modems.  Lab Preview Final Lab Project.  Physical Media. TCP/IP stack, History of the Internet Video, Exporting Harm video. RFID Tags, RFID in Passports?,and Verichips,Text Sections 14-15 (pages 88-91)
April 20
Last Quiz


Spring  2009 LAB Schedule and Assignments:
 
WEEK BEGINNING ASSIGNMENT
January 12 No Labs this week.  Labs Begin Tuesday January 20, the second week of classes [DUE: At least one journal entry in Blackboard discussion board for your lab, or e-mail to your lab instructor ]
January 19 Monday Lab students go to another lab just for this week [DUE: At least one journal entry in Blackboard discussion board for your lab]
Prepare an 4 - 5 minute PowerPoint slide presentation of your first year at UVM.  Include where you came from before UVM (home town, family, interests), why you came to UVM, how your first year at UVM has been, and future plans.  Create a PCBackup folder on zoo.  Learn how to save work to your zoo PCBackup directory.  (50 points)
January 26 [ DUE: 4 - 5 Minute Power Point presentation, 50 Points, At least one journal entry in Blackboard discussion board for your lab, or e-mail to your lab instructor ]
February 2 [ DUE:  At least one journal entry in Blackboard discussion board for your lab, or e-mail to your lab instructor ] Using the Operating System learn elementary WindowsXP commands including how to create folders and COPY files from the Hard disk to the flash memory stick.  Learn to use the text editor notepad. Learn to transfer files to and from your zoo account with FTP.  Understand the file structure on the PC and on zoo.  Due next Week: 1. Printout of your memory stick directory and your zoo PCBackup directory, 2. Printout of the text file you created explaining your previous computer experience and what you want to get out of AGRI 002, 3. Printout of SSH FTP window showing your PCBackup directory on zoo and your backed up files.  (20 Points)
February 9  [ DUE: PRINT OUT OF YOUR WORKING DISKETTE DIRECTORY, ZOO PCBACKUP DIRECTORY, & TEXT FILE, 20 points, At least one journal entry in Blackboard discussion board for your lab, or e-mail to your lab instructor ]
Learn about zoo accounts and Webmail and how to connect to ZOO via  SSH telnet software and send email with pine. If you use another email client, forward your zoo account to your mail client.  Learn to copy a text file from your instructor’s zoo account; edit it, and insert it in an e-mail message.  Due next week: Send an e-mail message to your lab instructor including 1. The file copied from your lab instructor’s account where you have filled in the blank spaces, 2.  Your signature file, and 3. Attached .jpg image from ftp showing PCBackup directory on zoo. (30 Points)
February 16
Monday Lab students go to another lab just for this week because of Presidents Day.  [ DUE: E-MAIL TO YOUR LAB INSTRUCTOR, 30 points, At least one journal entry in Blackboard discussion board for your lab, or e-mail to your lab instructor]
Learn Antivirus software. Work on formatting challenges in Word.  Create  your resume in the format given here.  Upload your resume and e-mail it to your lab instructor as an attachment in Word format.  Due next Week:  Hard copy of your resume e-mailed as an attachment (30 points).

February 23 [DUE: e-resume and paper resume, 30 points, At least one journal entry in Blackboard discussion board for your lab, or e-mail to your lab instructor]
Learn to create an Excel spreadsheet with approximately 300 cells (30 rows X 10 Columns, or 10 rows X 30 Columns).  Due next Week:  Spreadsheet display formula, and an appropriate graph of some of the data from the spreadsheet printout.
March 2  Note Tuesday Labs Meet! [ DUE:, Spreadsheet display, formulas, and graph printout, 30 points, At least one journal entry in Blackboard discussion board for your lab, or e-mail to your lab instructor ]
Learn to import the spreadsheet table and chart into Word.  Learn how to create a title page using MS-PowerPoint.  Due next Week: PowerPoint title page, a Printout from the word processor that contains: spreadsheet Table, Graph, and a discussion about the graph. Also you need to include had in a photocopy of the original data. (30 Points)

March 9 -13 Spring Break, No lectures, no labs!
March 16  
[ DUE: PowerPoint title page, Spreadsheet table, graph, discussion, and original data, 30 points, At least one journal entry in Blackboard discussion board for your lab, or e-mail to your lab instructor ] 
Learn to set up your own home page.  Due next Week: A print out of the web page and the HTML Source code.  Be sure to include the URL so your lab instructor can visit your page. (30 Points)
March 23  
[DUE: Web Page printout (with URL), source code. 30 points, At least one journal entry in Blackboard discussion board for your lab, or e-mail to your lab instructor ]
Create a new web page.  Learn to set up hyperlinks to other URLs and include pictures, tables, and email links in your new web page.  Include a cross- link to your resume. Due next week: Print your new  Web page (include URL), and source code. (30 points)

March 30  
[ DUE: New Web Page printout and source code, 30 points, At least one journal entry in Blackboard discussion board for your lab, or e-mail to your lab instructor
Introduction to the FINAL LAB PROJECT :  View the web page of instructions given to you by your lab instructor.  Read the instructions carefully.  You may wish to print them.  FINAL LAB PROJECT EARLY DEADLINE: 20 April Friday,  (4 pm)

April 6 Work on Final Lab Projects [Due: At least one journal entry ]
April 13   Work on Final Lab Projects [Due: At least one journal entry ]
April 20 LAST LABS!  Work on Final Lab Project  [Due: At least one journal entry ]

LAB DUE DATES:
Week Starting -----------> 26 Jan 2 Feb 19 Feb 16 Feb 23 Feb  2 March 9 March
SPRING BREAK
16 March 23 March 30 March 6 April  13 April
Lab 1/PowerPoint Due -10% -20%/redo  

 




Lab 2/dir  
Due -10% -20%/redo
 




Lab 3/email  

Due -10% -20%/redo  




Lab 4/Resume  


Due -10%   -20%/redo



Lab 5/Spreadsheet  



Due   -10% -20%/redo


Lab 6/pptCover/Word/Excel  




  Due -10% -20%/redo

Lab 7/Web 1  




 
Due -10% -20%/redo
Lab 8/Web 2  




 

Due -10%
-20%/redo


Final Lab Project Due Dates:
Early +10% Bonus Due Date: Friday April 18, 4pm
Due: Friday April 25, 4pm.   If late, -5% per day including Saturday and Sunday.
Absolute Deadline: Friday May 2, 4pm (-35%).  Projects will not be accepted after this deadline