Scarborough, MJ., Myers, KS., Fortney, NW., Ingle, AT., Donohue, TJ., Noguera, DR. 2022. Metagenome-assembled genomes from a microbiome converting xylose to medium-chain carboxylic acids. Microbiology Resource Announcements 11(4): e0115121. https://journals.asm.org/doi/10.1128/mra.01151-21
Neher, D., Harris, J., Horner, C., Scarborough, M. Badireddy, R., Faulkner, J., White, A., Darby, H., Farley, J., Von-Wettberg, E. 2022. Resilient Soils for Resilient Farms: An Integrative Approach to Assess, Promote and Value Soil Health for Small- and Medium-Size Farms. Phytobiomes.
Scarborough, MJ., Lawson, CE., DeCola, AC., Gois, IM. 2022. Microbiomes for sustainable biomanufacturing. Current Opionin in Micorbiology (65) 8. https://doi.org/10.1016/j.mib.2021.09.015
Stamatopoulou, P., Malkowski, J.*, Conrado, L., Brown, K.*, Scarborough, M. 2020. Fermentation of Organic Residues to Beneficial Chemicals: A Review of Medium-Chain Fatty Acid Production. Processes 8(12), 1571. https://doi.org/10.3390/pr8121571.
Scarborough, MJ., Hamilton, JJ., Erb, EE., Donohue, TJ., Noguera, DR. 2020. Diagnosing and predicting mixed culture fermentations with unicellular and guild-based metabolic models. mSystems 5:e00755- 20. https://doi.org/10.1128/mSystems.00755-20.
Scarborough, MJ., Meyers, KM., Donohue, TJ., Noguera, DR. 2020. Multi-omic analysis of medium-chain fatty acid synthesis by Candidatus Pseudoramibacter fermentans, sp. nov., and Candidatus Weimeria bifida, gen. nov., sp. nov.. Applied and Environmental Microbiology 10.1128/AEM.02242-19.
Scarborough MJ, Lawson CE, Hamilton JJ, Donohue TJ, Noguera DR. 2018. Metatranscriptomic and thermodynamic insights into medium-chain fatty acid
production using an anaerobic microbiome. mSystems 3:e00221-18. https://doi.org/10.1128/mSystems.00221-18.
Scarborough, M. J., Lynch, G., Dickson, M., McGee, M., Donohue, T. J., &
Noguera, D. R. 2018. Increasing the economic value of lignocellulosic
stillage through medium-chain fatty acid production. Biotechnology for
Biofuels, 11(1), 200. doi:10.1186/s13068-018-1193-x
Y Hu, M Scarborough, H Aguirre-Villegas, RA Larson, DR Noguera. 2018. A
Supply Chain Framework for the Analysis of the Recovery of Biogas and Fatty
Acids from Organic Waste. ACS Sustainable Chemistry & Engineering 6 (5),
6211-6222. https://doi.org/10.1021/acssuschemeng.7b04932
Keene, N. A., Reusser, S. R., Scarborough, M. J., Grooms, A. L., Seib, M.,
Santo Domingo, J., & Noguera, D. R. 2017. Pilot plant demonstration of stable
and efficient high rate biological nutrient removal with low dissolved oxygen
conditions. Water Res, 121, 72-85. doi:10.1016/j.watres.2017.05.029
Burger, B. T., Imam, S., Scarborough, M. J., Noguera, D. R., & Donohue, T. J.
2017. Combining Genome-Scale Experimental and Computational Methods To
Identify Essential Genes in Rhodobacter sphaeroides. mSystems, 2(3).
doi:10.1128/mSystems.00015-17