Biology 6
Spring, 2007

Here are two general biology dictionaries:  searchable Biotech (UT) and alphabetical  UCMP - the latter includes terms from a very broad array of biological sciences as well as geology.

  There will be a WebCT page for this class.  As of 16 January it is not functioning properly so readings are listed here.

week
date
topic
readings
1
Jan
17
Introduction to the Scientific method
Common Nonsense chapters 1 and 2

19
Biological use of the scientific method
Pigliucci chapter 4
2
22
Common misunderstandings about science
Pigliucci chapter 5 sections 1-5

24-26
Introduction to evolution:  What is it, and why all the fuss?
Pigliucci chapter 2
Evolution:  definition
Fact or theory?
3
29
History of evolutionary thought, and the impact of Darwin
Palumbi chapters 1, 2
Explore "Darwin" at AMNH exhibit

31Jan - 2 Feb
Basic genetics
Tour the Basics
4
Feb
5
From genotype to phenotype
transcribe and translate a gene, protein function, genes and body patterns

7
Geological history of earth:  a brief overview
USGS on continental drift


9
Extinction and the fossil record
 Work through Deep time:  an interactive exercise.
Tour the Berkeley Time machine
5
12
Darwin's birthday
The origin of variation
Genetic variation (follow "next page" buttons to read entirely)

14
Mutation and variation:  genetics and evolution
Mutations are random, the Lederberg Experiment, Avida experiment

16 Feb
Natural selection
Palumbi chapter 3
Evolution 101: Mechanisms (skip genetic variation)
6
19 Feb
No class:  Presidents' day
 

21 Feb
Other modes of evolution Finish Evolution 101:Mechanisms

23 Feb
Evolution and adaptation Evolution 101: Adaptations (all "explore further" topics).
7
26 Feb
Limits on evolution;  nothing is perfect. Evolution 101: Misconceptions about adaptation (all topics)

28 Feb
Exam 1

2 Mar
Student talks #1:  Evolution in the wild
Evolution 101:  Microevolution, mechanisms, examples.
8
5 Mar
Evolution in the lab:  running mice
Evolution 101:  microevolution in the lab
Sex and the single guppy:  run the simulatio 3 times with different conditions.  Be prepared to discuss your results.

7 Mar
Pesticide resistance in insects
Palumbi chapter 6

9 Mar
Unintentional selection: overharvesting and fish life
Palumbi chapter 8
9
12 Mar
Spring recess

10
19 Mar
Student talks #2:  Examples of human-driven evolution Pigliucci chapter 5

21 Mar
Creationist fallacies and non-controvercial controversies
Pigliucci chapter 6

For fun:  the FSM 

23 Mar
Student talks #3:  Science and religion
Scan statements from major US religious organizations
11
26 Mar
Open discussion:  Is the US becoming anti-intellectual?
Pigliucci chapter 3

28 Mar
Speciation;  new evidence of new species
Evolution 101:  Macroevolution (all sections)

20 Mar
Phylogenetics:  hypotheses about history
Evolution 101:  Patterns, through and including Tree building
12
2 Apr
Character evolution;  how biologists use trees
Evolution 101:  Classification, all parts

4 Apr
Student talks #4:  Trees in literature and biology


6 Apr
Evolutionary history:  deep roots
Evolution 101:  adding time (all parts)
13
9 Apr
Human evolution
Palumbi chapter 9


11 Apr
Student talks #5:  Who are we?


13 Apr
Open discussion:  are humans still evolving?
The Darwin Awards 
Finish reading Galapagos
14
16 Apr
Exam 2


18 Apr
Student talks #6:  Legal issues in evolution


20 Apr
Evolution of diseases, part 1:  antibiotic resistance
Palumbi chapter 4
15
23 Apr
Evolution of diseases part II:  H5N1 and the threat of a new pandemic
Palumbi chapter 5

25 Apr
Biotechnology and evolution
Palumbi chapter 7

27 Apr
Biotechnology and medicine:  medical genetics

16
30 Apr
Student talks #6:  Medical evolution


2 May
Open discussion:  How far should medical genetics go?






11 May
Exam 3  3:30-6:30, regular classroom