Apple Diseases

Click here for pesticide overview of all apple diseases.

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Diseases (Berkett, 2000)

Apple Scab: Apple scab, caused by the fungus Venturia inaequalis, is the most important disease of apples in Vermont. This is because our humid, temperate climate and frequent rains, particularly in spring, provide favorable conditions for infection by the fungal pathogen and our major cultivars are highly susceptible to scab. The disease can be devastating, causing reduction in fruit quality and yield. Severe foliar infection can lead to premature defoliation. The key to managing scab is to prevent primary infections by ascospores in the spring. By successfully preventing or limiting the development of primary lesions, the threat of continued infection by conidia is reduced. There are six scab management strategies: (1) Prevention, which includes planting scab resistant cultivars and cultural practices to reduce inoculum and enhance the efficacy of fungicides; (2) Delayed First-Spray Strategy, which involves predicting the orchard’s level of "scab-risk" by a sequential sampling procedure and using an action threshold to determine when to begin a fungicide program; (3) Protection Strategy, which is designed to maintain a protective fungicide residue barrier on or in leaves and fruit; (4) Post-Infection Strategy, which is designed to apply fungicide when there has been an infection period; (5) Four-Spray-SI Schedule, which involves four applications of a sterol-inhibiting fungicide combined with a protectant beginning approximately 1-3 weeks after green tip; and (6) Conidia Suppression, which involves using fungicides to suppress conidia production and further secondary infections. An array of fungicides are essential to manage apple scab effectively and address resistance concerns. to top

Bitter Rot: This disease is a summer disease of apple fruit caused by the fungus Glomerella cingulata. It is considered a more serious disease problem in southern apple growing regions of the U.S. but extensive damage can develop rapidly in New England during a period of prolonged warm, wet weather if inoculum sources are present. At the optimum temperature for infection (79 F), infection can occur with a wet period as short as 5 hours. Fruit lesions appear as brown, slightly sunken spots. Bitter rot lesions expand most rapidly at a temperature of 86 F. Severely infected fruit become shriveled and persist on the tree as mummified fruit. Control of bitter rot is based on sanitation and protectant fungicide sprays. Removal of mummified fruit and dead wood on the tree or on the ground is important. Shoots killed by fire-blight can be colonized by the bitter rot fungus and serve as an inoculum source during that same growing season. The EBDC fungicides are the most effective materials for preventing bitter rot, but their label makes them unavailable for use. Of the other apple fungicides, only captan has a "good" rating for bitter rot prevention. to top

Black Rot: Black rot is caused by the fungus Botryosphaeria obtusa. The economic impact of the disease varies from orchard to orchard. The name black rot refers to fruit rot or canker symptoms, while leaf-spot symptoms are called frogeye. In addition, the fungus can cause a core rot around the seed cavity in developing fruit. Frogeye symptoms first appear about 1 to 3 weeks after petal fall. Leaf infections first look like small purple flecks which rapidly enlarge into circular lesions about 1/8" – 1 /4" in diameter. The lesions resemble "frog eyes" in that they retain a purple margin and have a light brown/tan center. Fruit (i.e., sepal )infections can occur as soon as bud scales begin to loosen. These early infections can result in blossom-end rot later in the season. Infections of young fruit after petal fall begin as reddish flecks but then develop into purplish pimples which do not enlarge into dark brown necrotic areas until the fruit begin to mature. Additional infection of mature fruit result in black, irregularly shaped lesion surrounded by a red halo. As these lesions expand, they are characterized by alternating brown and black concentric bands. The flesh of the decayed area remains firm and leathery. The core rot caused by the black rot fungus is typically "moldy" around the seed cavity, and may cause fruit to redden and drop 3 to 6 weeks early.. Infected areas of branches and limbs are reddish brown and slightly sunken. Cankers can expand to several feet in length. Fire-blight cankers and cold-damaged tissue are rapidly colonized by the black rot fungus. Fruiting bodies (pycnidia) are abundantly produced on dead bark, dead twigs, and mummified fruit. Ascospores and conidia are released when it rains throughout the growing season. Infected leaves and fruit are often found below mummies and old fire blight cankers. Removing cankered wood, mummified fruit, and chopping or removing pruned wood are important steps in the management of this disease. If a disease problem persists after implementing these sanitation tactics, then multiple applications of captan or a benomyl or thiophanate-methyl in combination with captan may be needed from after petal fall through mid-to late- August to prevent fruit infections. to top

Calyx End Rot and Dry-Eye Rot: Sometimes lumped together and called blossom-end rot because symptoms are very similar, these diseases are actually caused by two different fungi. Calyx end rot is a soft rot, which may expand to cover about 1/3 of the end of a fruit, and is caused by Sclerotinia sclerotiorum. Dry-eye rot is a shallow, hard rot over a smaller area, often with a red border, and is caused by Botrytis cinerea. The diseases first appear about 1 month after petal fall, when the calyx end of infected fruit reddens and then rots. (See Moldy Core which also causes fruit to redden prematurely.) The diseases are most often seen on McIntosh, Paulared, and Delicious. Spores are produced on either mummified fruit from previous years, or on a number of wild host plants, and released from bloom through a few weeks after petal fall. The diseases occur sporadically, and are associated with wet periods during bloom, petal fall and early fruit set. While no controlled studies have been done on controlling these diseases, if a benzimidazole fungicide is being used for other disease reasons (such as for scab management) at petal fall and 10-14 days later, the application may help in preventing infections in orchards where there has been an end rot problem, particularly if there was a prolonged wet period during bloom-petal fall. to top

Fire Blight: Fire blight is not a common disease in Vermont, but it can be very destructive on susceptible cultivars. The threat of this disease is increasing in Vermont with the planting of new cultivars that are more susceptible to the disease. The disease is caused by a bacterium, Erwinia amylovora. The bacteria overwinters in bark tissues along the edges of cankers that were produced from infections the previous season. Rain or insects can disseminate the inoculum from the cankers to the stigmatic surfaces of blossoms where the bacteria multiplies profusely. The bacteria can spread from blossom to blossom by bees or by rain. The bacteria penetrates host tissue through wounds or natural openings in the presence of water. Once inside the host, the pathogen will continue to multiply and kill plant cells. Flowers, fruit, shoots, branches and trunks can become infected. Recently infected tissues become water-soaked in appearance and may emit a watery, milky to light orange ooze on humid days. As the tissue dies it turns from dark green to brown and black. When susceptible cultivars are grown on susceptible rootstock, such as M.26 and M9, infections of the scion or suckers at the base of the tree can spread into the rootstock and kill it within a year. Successful management of fire blight takes an integrated approach including resistant cultivars and rootstocks; removing sources of inoculum; attention to proper nutrition so trees are not overly vigorous; and effective timing of treatment, when warranted, to prevent infection. to top

Flyspeck and Sooty Blotch: These two diseases blemish the fruit and present difficult disease management decisions because they do not occur with the same intensity every year and they occur at a time when growers would like to minimize pesticide applications. The diseases are caused by different fungi, and often occur together on unprotected fruit. Sooty blotch is more easily controlled with fungicides, and in most cases one or two summer fungicide applications provide adequate protection. Flyspeck is more difficult to control. Growth of the pathogens depends on humidity. If relative humidity is very high ( 95% or above) then the pathogens will grow. Optimum temperatures for growth are at 60F to 75F, making warm summer nights ideal for sooty blotch and flyspeck development. Many conditions can contribute to maintaining high humidity in apple tree canopies, and therefore increase incidence of sooty blotch and flyspeck. Practices which improve air circulation and drying will reduce the diseases. Summer pruning, thinning to break up fruit clusters, mowing, and cutting dense hedgerows are recommended where flyspeck and sooty blotch are problems. Cultural practices can significantly reduce these disease problems, but fungicides are generally required to maintain commercial fruit quality in wet, warm summers. Timing of fungicide applications will depend on rain and the fungicides used. to top

Moldy Core: This disease is characterized by a visible fungal growth in the seed cavity and core of some apple cultivars, particularly Delicious and McIntosh. In storage, the disease may progress into the flesh immediately surrounding the core causing a dry rot. While Alternaria spp. are commonly isolated from moldy core apples, other fungi are also associated with the disease. Sometimes, moldy core disease will cause fruit to redden prematurely during July or August. More frequently, fruit do not show any external symptoms. Presumably, infection occurs through the calyx when it remains open, allowing spores to enter the seed cavity. Once the fungus is within the fruit, it is protected and fungicides have no effect. No specific management tactic for this disease has been developed although fungicides applied during bloom may provide some control. to top

Phytophthora: Crown, Root and Collar Rots: These fungal diseases are caused by a number of soil-inhabiting Phytophthora species including Phytophthora cactorum. Some species may be ubiquitous soil inhabitants. The above ground symptoms of these diseases are similar to those of vole-girdled trees, i.e. reduced vigor and growth, sparse foliage. Fruit may be small and color prematurely. Collar rot is a disease that affects the lower trunk (scion) above the rootstock-scion junction. Crown rot is a disease of the underground rootstock portion of the trunk and base of primary roots Underneath the bark, infected tissue is reddish brown.Root rot involves infection of the roots away from the crown. Although less common, collar rot is more dangerous than crown or root rot since with collar rot, the tree often declines or dies very quickly, especially if it is a small tree. Occurrence of these diseases is sporadic and is much more likely where susceptible rootstock is planted on a poorly drained site. Site selection and soil water management are most important in preventing crown, collar, and root rots. Soils should have adequate drainage throughout the year so that the soil is not saturated with water for prolonged periods. Water saturation of soil for 24 hours is sufficient to initiate infections. Selection of rootstocks adapted to the site is also important. Fungicides are important but are not a substitute for good site preparation and the use of rootstocks adapted for the intended orchard site. to top

Post-Harvest Rots: Several fungi, notably Penicillium spp. (causeing blue mold) and Botrytis sp. (causeing gray mold) are involved in post-harvest storage rots on apples. Generally, these rots are not a problem unless apples become wet, as in the process of applying a scald inhibitor (diphenylamine or DPA). Significant problems with Empire have occurred. The following practices are part of an integrated management approach for post-harvest rots: (1) Disinfect boxes and bins before they are reused; (2) Harvest fruit at the proper maturity level. and handle fruit so as to minimize bumping and bruising; (3) During harvest, place bins and boxes on sod and not on bare soil; (4) Cool fruit rapidly after harvest to minimize opportunities for decays to become established; (5) Remove culls and leaf debris from the packing shed daily. Post-harvest treatment of apples for control of storage rots should not be done except when fruit must be treated for storage scald prevention or have post-harvest calcium treatments. to top

Powdery Mildew: The powdery mildew fungus, Podosphaera leucotricha, can infect foliage, shoots, blossoms and fruit. Infected shoots have a slower growth rate; severely infected leaves are stunted and never attain their normal size or shape. Infected leaves can become curled and brittle, often dying prematurely. Photosynthesis is adversely affected and severe infections result in reduced growth and vigor of the tree. Mildew can affect yield directly through the abortion of severely infected blossoms or the russetting of infected fruit. Cultivars vary in there susceptibility to the disease. Highly susceptible cultivars include Ginger Gold, Cortland, Gala, Paulared, Idared, Rome Beauty, Granny Smith, and Jonathan. This disease will increase in importance in Vermont as more susceptible cultivars are planted and as warmer winters occur. The sterol inhibiting fungicides and the new strobilurin fungicides are effective against powdery mildew but their repeated use raises resistance concerns. Sulfur is an alternative mildew fungicide, but applications have to begin earlier (i.e., Tight Cluster) than the other fungicides and, because of short residual activity, reapplied every 7 days for good results under high disease pressure. Benomyl and thiophanate-methyl have been used against powdery mildew but it has been reported that they have provided poor control in some orchards in recent years. to top

Rusts: Cedar-apple rust and quince rust are not as important in Vermont as they are in southern New England but they are still of economic concern. Cedar-apple rust is caused by the fungus Gymnosporangium juniperi-virginianae, and is recognized by the brilliant yellow and orange leaf spots and fruit lesions. Cultivar susceptibility varies. The quince rust fungus, Gymnosporangium clavipes, does not cause leaf lesions, but fruit infections result in dark green lesions near the calyx end which often distorts the fruit. Quince rust is more common on Red Delicious. Quince rust is most likely to cause economic damage when trees stay wet for more than 48 hours between tight cluster and late pink with an average temperature above 50 F. For susceptible cultivars, management of the rust diseases requires fungicide applications. Spores are released from galls throughout any rainy period from around the last week of April until mid-June, with peak releases from early pink to full bloom. In orchards were rust diseases have been a problem, a fungicide effective against rust should be applied before rains during this period. Removal of eastern red cedar and other juniper trees surrounding the orchard aids in preventing rust infections. to top


Compiled by Lorraine P. Berkett, IPM Specialist, and M. Elena Garcia, Tree Fruit Specialist, Department of Plant & Soil Science, University of Vermont, Burlington, VT 05405. (802) 656-2630


Last modified: August 07, 2000

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